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Freiherr von Boeselager R, Pfeifer E, Frunzke J. Cytometry meets next-generation sequencing - RNA-Seq of sorted subpopulations reveals regional replication and iron-triggered prophage induction in Corynebacterium glutamicum. Scientific reports. 2018;8:14856.
Kampf J, Stülke J. Cyclic di-GMP signaling meets extracellular polysaccharide synthesis in Bacillus subtilis. Env. Microbiol. Rep. 2017;9:182-185.
Heroven AK, Böhme K, Rohde M, Dersch P. A Csr-type regulatory system, including small non-coding RNAs, regulates the global virulence regulator RovA of Yersinia pseudotuberculosis through RovM. Mol Microbiol. 2008;68(5):1179-95.
Heroven AK, Böhme K, Dersch P. The Csr/Rsm system of Yersinia and related pathogens: A post-transcriptional strategy for managing virulence. RNA Biol. 2012;9(4):379-91.
Goetz A, Lechner M, Mader A, von Bronk B, Frey E, Opitz M. CsrA and its regulators control ColicinE2 release in Escherichia coli. Scientific reports. 2018;8(1):6537.
Bettenbrock K, Sauter T, Jahreis K, Kremling A, Lengeler JW, Gilles E-D. Correlation between growth rates, EIIACrr phosphorylation, and intracellular cyclic AMP levels in Escherichia coli K-12. J Bacteriol. 2007;189(19):6891-900.
Baumgart M, Unthan S, Rückert C, Sivalingam J, Grünberger A, Kalinowski J, Bott M, Noack S, Frunzke J. Construction of a Prophage-Free Variant of Corynebacterium glutamicum ATCC 13032 for Use as a Platform Strain for Basic Research and Industrial Biotechnology. Appl Environ Microbiol. 2013;79(19):6006-15.
Nöh K, Wahl A, Wiechert W. Computational tools for isotopically instationary 13C labeling experiments under metabolic steady state conditions. Metab Eng. 2006;8(6):554-77.
von Bronk B, Goetz A, Opitz M. Complex microbial systems across different levels of description. Phys. Biol. 2018;15:051002.
Bischofs IB, Hug JA, Liu AW, Wolf DM, Arkin AP. Complexity in bacterial cell-cell communication: quorum signal integration and subpopulation signaling in the Bacillus subtilis phosphorelay. Proc Natl Acad Sci U S A. 2009;106(16):6459-64.
Schuldes J, Rodriguez Orbegoso M, Schmeisser C, Krishnan HB, Daniel R, Streit WR. Complete genome sequence of the broad-host-range strain Sinorhizobium fredii USDA257. J Bacteriol. 2012;194(16):4483.
McIntosh M, Krol E, Becker A. Competitive and cooperative effects in quorum-sensing-regulated galactoglucan biosynthesis in Sinorhizobium meliloti. J Bacteriol. 2008;190(15):5308-17.
Maier B. Competence and Transformation. In: Bacillus: Cellular and Molecular Biology. Bacillus: Cellular and Molecular Biology. ; 2011. p. .
Behr S, Brameyer S, Witting W, Schmitt-Kopplin P, Jung K. Comparative genomics of LytS/LytTR histidine kinase/response regulator systems in γ-proteobacteria. PLOS ONE. 2017;12(8):e0182993.
Heermann R, Fuchs TM. Comparative analysis of the Photorhabdus luminescens and the Yersinia enterocolitica genomes: uncovering candidate genes involved in insect pathogenicity. BMC Genomics. 2008;9:40.
Dragoš A, Lieleg O KÁT, Martin M, Falcón García C, Kricks L, Pausch P, Heimerl T, Bálint B, Maróti G, Bange G, Lopez D. Collapse of genetic division of labor and evolution of autonomy in pellicle biofilms. Nature Microbiology. 2018;3(12):1451-1460.
Schlüter J-P, Czuppon P, Schauer O, Pfaffelhuber P, McIntosh M, Becker A. Classification of phenotypic subpopulations in isogenic bacterial cultures by triple promoter probing at single cell level. J Biotechnol. 2015;198:3-14.
Laganenka L, Colin R, Sourjik V. Chemotaxis towards autoinducer 2 mediates autoaggregation in Escherichia coli. Nat Commun. 2016;7:12984.
Neumann S, Grosse K, Sourjik V. Chemotactic signaling via carbohydrate phosphotransferase systems in Escherichia coli. Proc Natl Acad Sci U S A. 2012.
Weber MF, Poxleitner G, Hebisch E, Frey E, Opitz M. Chemical warfare and survival strategies in bacterial range expansions. J R Soc Interface. 2014;11(96):20140172.
Kröger C, Fuchs TM. Characterization of the myo-inositol utilization island of Salmonella enterica serovar Typhimurium. J Bacteriol. 2009;191(2):545-54.
Mascher T, Margulis NG, Wang T, Ye RW, Helmann JD. Cell wall stress responses in Bacillus subtilis: the regulatory network of the bacitracin stimulon. Mol Microbiol. 2003;50(5):1591-604.
Serra DO, Richter AM, Hengge R. Cellulose as an architectural element in spatially structured Escherichia coli biofilms. J Bacteriol. 2013;195(24):5540-54.
Radeck J, Fritz G, Mascher T. The cell envelope stress response of Bacillus subtilis: From static signaling devices to dynamic regulatory network. Curr. Genet. 2017;63:79-90.
García-Betancur J-C, Goñi-Moreno A, Horger T, Schott M, Sharan M, Eikmeier J, Wohlmuth B, Zernecke A, Ohlsen K, Kuttler C. Cell differentiation defines acute and chronic infection cell types in Staphylococcus aureus. eLife. 2017;6:e28023.

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