Publications

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Journal Article
Venkatesh RG, Kembou Koungni FC, Paukner A, Stratmann T, Blissenbach B, Schnetz K. BglJ-RcsB heterodimers relieve repression of the Escherichia coli bgl operon by H-NS. J Bacteriol. 2010;192(24):6456-64.
Weber MF, Poxleitner G, Hebisch E, Frey E, Opitz M. Chemical warfare and survival strategies in bacterial range expansions. J R Soc Interface. 2014;11(96):20140172.
Nöh K, Wahl A, Wiechert W. Computational tools for isotopically instationary 13C labeling experiments under metabolic steady state conditions. Metab Eng. 2006;8(6):554-77.
Bettenbrock K, Sauter T, Jahreis K, Kremling A, Lengeler JW, Gilles E-D. Correlation between growth rates, EIIACrr phosphorylation, and intracellular cyclic AMP levels in Escherichia coli K-12. J Bacteriol. 2007;189(19):6891-900.
Bertels F, Merker H, Kost C. Design and characterization of auxotrophy-based amino acid biosensors. PLoS One. 2012;7(7):e41349.
Grünberger A, Paczia N, Probst C, Schendzielorz G, Eggeling L, Noack S, Wiechert W, Kohlheyer D. A disposable picolitre bioreactor for cultivation and investigation of industrially relevant bacteria on the single cell level. Lab Chip. 2012;12(11):2060-8.
Schulmeister S, Grosse K, Sourjik V. Effects of receptor modification and temperature on dynamics of sensory complexes in Escherichia coli chemotaxis. BMC Microbiol. 2011;11:222.
Pande S, Merker H, Bohl K, Reichelt M, Schuster S, de Figueiredo LF, Kaleta C, Kost C. Fitness and stability of obligate cross-feeding interactions that emerge upon gene loss in bacteria. ISME J. 2014;8(5):953-62.
Stecher B, Denzler R, Maier L, Bernet F, Sanders MJ, Pickard DJ, Barthel M, Westendorf AM, Krogfelt KA, Walker AW. Gut inflammation can boost horizontal gene transfer between pathogenic and commensal Enterobacteriaceae. Proc Natl Acad Sci U S A. 2012;109(4):1269-74.
Hebisch E, Knebel J, Landsberg J, Frey E, Leisner M. High variation of fluorescence protein maturation times in closely related Escherichia coli strains. PLoS One. 2013;8(10):e75991.
Marbach A, Bettenbrock K. lac operon induction in Escherichia coli: Systematic comparison of IPTG and TMG induction and influence of the transacetylase LacA. J Biotechnol. 2012;157(1):82-8.
D'Souza G, Waschina S, Pande S, Bohl K, Kaleta C, Kost C. Less is more: selective advantages can explain the prevalent loss of biosynthetic genes in bacteria. Evolution. 2014;68(9):2559-70.
Probst C, Grünberger A, Wiechert W, Kohlheyer D. Microfluidic growth chambers with optical tweezers for full spatial single-cell control and analysis of evolving microbes. J Microbiol Methods. 2013;95(3):470-6.
Kröger C, Stolz J, Fuchs TM. myo-Inositol transport by Salmonella enterica serovar Typhimurium. Microbiology. 2010;156(Pt 1):128-38.
Brachmann AO, Brameyer S, Kresovic D, Hitkova I, Kopp Y, Manske C, Schubert K, Bode HB, Heermann R. Pyrones as bacterial signaling molecules. Nat Chem Biol. 2013;9(9):573-8.
Bettenbrock K, Fischer S, Kremling A, Jahreis K, Sauter T, Gilles E-D. A quantitative approach to catabolite repression in Escherichia coli. J Biol Chem. 2006;281(5):2578-84.
Stratmann T, Pul Ü, Wurm R, Wagner R, Schnetz K. RcsB-BglJ activates the Escherichia coli leuO gene, encoding an H-NS antagonist and pleiotropic regulator of virulence determinants. Mol Microbiol. 2012;83(6):1109-23.
Jordan S, Junker A, Helmann JD, Mascher T. Regulation of LiaRS-dependent gene expression in bacillus subtilis: identification of inhibitor proteins, regulator binding sites, and target genes of a conserved cell envelope stress-sensing two-component system. J Bacteriol. 2006;188(14):5153-66.
Kalinin Y, Neumann S, Sourjik V, Wu M. Responses of Escherichia coli bacteria to two opposing chemoattractant gradients depend on the chemoreceptor ratio. J Bacteriol. 2010;192(7):1796-800.
Steuer R, Waldherr S, Sourjik V, Kollmann M. Robust signal processing in living cells. PLoS Comput Biol. 2011;7(11):e1002218.
Boehm A, Kaiser M, Li H, Spangler C, Kasper CA, Ackermann M, Kaever V, Sourjik V, Roth V, Jenal U. Second messenger-mediated adjustment of bacterial swimming velocity. Cell. 2010;141(1):107-16.
Serra DO, Hengge R. Stress responses go three dimensional - the spatial order of physiological differentiation in bacterial macrocolony biofilms. Environ Microbiol. 2014;16(6):1455-71.
Oleksiuk O, Jakovljevic V, Vladimirov N, Carvalho R, Paster E, Ryu WS, Meir Y, Wingreen NS, Kollmann M, Sourjik V. Thermal robustness of signaling in bacterial chemotaxis. Cell. 2011;145(2):312-21.
Megerle JA, Fritz G, Gerland U, Jung K, Rädler JO. Timing and dynamics of single cell gene expression in the arabinose utilization system. Biophys J. 2008;95(4):2103-15.
Nolle N, Schuster CF, Bertram R. Two paralogous yefM-yoeB loci from Staphylococcus equorum encode functional toxin-antitoxin systems. Microbiology. 2013;159(Pt 8):1575-85.